SSAGES
0.9.3
Software Suite for Advanced General Ensemble Simulations
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This is the complete list of members for SSAGES::ANNCV, including all inherited members.
activations_ (defined in SSAGES::ANNCV) | SSAGES::ANNCV | private |
ANNCV(Label atomids, double scaling_factor, std::vector< unsigned int > num_nodes, std::string coeff_file, std::vector< std::string > activations, int out_index) | SSAGES::ANNCV | inline |
atomids_ (defined in SSAGES::ANNCV) | SSAGES::ANNCV | private |
back_prop(std::vector< Vector > &output_of_layers) (defined in SSAGES::ANNCV) | SSAGES::ANNCV | inline |
bias_ (defined in SSAGES::ANNCV) | SSAGES::ANNCV | private |
bounds_ | SSAGES::CollectiveVariable | protected |
boxgrad_ | SSAGES::CollectiveVariable | protected |
Build(const Json::Value &json, const std::string &path) | SSAGES::ANNCV | inlinestatic |
BuildCV(const Json::Value &json, const std::string &path) | SSAGES::CollectiveVariable | static |
CollectiveVariable() | SSAGES::CollectiveVariable | inline |
Evaluate(const Snapshot &snapshot) override | SSAGES::ANNCV | inline |
SSAGES::CollectiveVariable::Evaluate(const class Snapshot &)=0 | SSAGES::CollectiveVariable | pure virtual |
forward_prop(Vector &input_vec) (defined in SSAGES::ANNCV) | SSAGES::ANNCV | inline |
GetBoundaries() | SSAGES::CollectiveVariable | inline |
GetBoxGradient() const | SSAGES::CollectiveVariable | inline |
GetDifference(double location) const | SSAGES::CollectiveVariable | inlinevirtual |
GetGradient() const | SSAGES::CollectiveVariable | inline |
GetMinimumImage(double) const | SSAGES::CollectiveVariable | inlinevirtual |
GetPeriodicValue(double location) const | SSAGES::CollectiveVariable | inlinevirtual |
GetValue() const | SSAGES::CollectiveVariable | inline |
grad_ | SSAGES::CollectiveVariable | protected |
Initialize(const Snapshot &snapshot) override | SSAGES::ANNCV | inline |
SSAGES::CollectiveVariable::Initialize(const class Snapshot &) | SSAGES::CollectiveVariable | inlinevirtual |
num_nodes_ (defined in SSAGES::ANNCV) | SSAGES::ANNCV | private |
out_index_ (defined in SSAGES::ANNCV) | SSAGES::ANNCV | private |
scaling_factor_ (defined in SSAGES::ANNCV) | SSAGES::ANNCV | private |
val_ | SSAGES::CollectiveVariable | protected |
weight_coeff_ (defined in SSAGES::ANNCV) | SSAGES::ANNCV | private |
~CollectiveVariable() | SSAGES::CollectiveVariable | inlinevirtual |