_A | SSAGES::ForwardFlux | protected |
_current_interface | SSAGES::ForwardFlux | protected |
_cvvalue | SSAGES::ForwardFlux | protected |
_cvvalue_previous | SSAGES::ForwardFlux | protected |
_fluxA0 | SSAGES::ForwardFlux | protected |
_generator | SSAGES::ForwardFlux | protected |
_initialFluxFlag | SSAGES::ForwardFlux | protected |
_interfaces | SSAGES::ForwardFlux | protected |
_interfaces_increase | SSAGES::ForwardFlux | protected |
_M | SSAGES::ForwardFlux | protected |
_N | SSAGES::ForwardFlux | protected |
_N0Target | SSAGES::ForwardFlux | protected |
_N0TotalSimTime | SSAGES::ForwardFlux | protected |
_nfailure_total | SSAGES::ForwardFlux | protected |
_ninterfaces | SSAGES::ForwardFlux | protected |
_output_directory | SSAGES::ForwardFlux | protected |
_P | SSAGES::ForwardFlux | protected |
_pB | SSAGES::ForwardFlux | protected |
_pop_tried_but_empty_queue | SSAGES::ForwardFlux | protected |
_rate | SSAGES::ForwardFlux | protected |
_S | SSAGES::ForwardFlux | protected |
_saveTrajectories | SSAGES::ForwardFlux | protected |
_trajectory_file | SSAGES::ForwardFlux | protected |
AddNewIDsToQueue() | SSAGES::ForwardFlux | protected |
AppendTrajectoryFile(Snapshot *, std::ofstream &) | SSAGES::ForwardFlux | protected |
Build(const Json::Value &json, const MPI_Comm &world, const MPI_Comm &comm, const std::string &path) | SSAGES::ForwardFlux | static |
BuildMethod(const Json::Value &json, const MPI_Comm &world, const MPI_Comm &comm, const std::string &path) | SSAGES::Method | static |
CheckForInterfaceCrossings(Snapshot *, const class CVManager &)=0 | SSAGES::ForwardFlux | protectedpure virtual |
CheckInitialStructure(const CVList &) | SSAGES::ForwardFlux | protected |
comm_ | SSAGES::Method | protected |
ComputeCommittorProbability(Snapshot *) | SSAGES::ForwardFlux | protected |
ComputeInitialFlux(Snapshot *, const CVList &) | SSAGES::ForwardFlux | protected |
ComputeTransitionProbabilities() | SSAGES::ForwardFlux | protected |
cvmask_ | SSAGES::Method | protected |
EventListener(unsigned int frequency) | SSAGES::EventListener | inline |
FFSConfigIDQueue | SSAGES::ForwardFlux | protected |
FluxBruteForce(Snapshot *, const CVList &) | SSAGES::ForwardFlux | protected |
ForwardFlux(const MPI_Comm &world, const MPI_Comm &comm, double ninterfaces, std::vector< double > interfaces, unsigned int N0Target, std::vector< unsigned int > M, bool initialFluxFlag, bool saveTrajectories, unsigned int currentInterface, std::string output_directory, unsigned int frequency) | SSAGES::ForwardFlux | inline |
frequency_ | SSAGES::EventListener | private |
GetFrequency() const | SSAGES::EventListener | inline |
GetNumWalkers(const MPI_Comm &world, const MPI_Comm &comm) | SSAGES::EventListener | inlinestatic |
GetWalkerID(const MPI_Comm &world, const MPI_Comm &comm) | SSAGES::EventListener | inlinestatic |
HasCrossedInterface(double current, double prev, unsigned int i) | SSAGES::ForwardFlux | protected |
HasReturnedToA(double current) | SSAGES::ForwardFlux | protected |
InitializeQueue(Snapshot *, const CVList &)=0 | SSAGES::ForwardFlux | protectedpure virtual |
initializeQueueFlag | SSAGES::ForwardFlux | protected |
IsMasterRank(const MPI_Comm &comm) | SSAGES::EventListener | inlinestatic |
iteration_ | SSAGES::ForwardFlux | protected |
Lambda0ConfigLibrary | SSAGES::ForwardFlux | protected |
Method(unsigned int frequency, const MPI_Comm &world, const MPI_Comm &comm) | SSAGES::Method | inline |
myFFSConfigID | SSAGES::ForwardFlux | protected |
OpenTrajectoryFile(std::ofstream &) | SSAGES::ForwardFlux | protected |
PopQueueMPI(Snapshot *, const CVList &, unsigned) | SSAGES::ForwardFlux | protected |
PostIntegration(Snapshot *snapshot, const class CVManager &cvmanager) override=0 | SSAGES::ForwardFlux | pure virtual |
PostSimulation(Snapshot *snapshot, const class CVManager &cvmanager) override | SSAGES::ForwardFlux | virtual |
PreSimulation(Snapshot *snapshot, const class CVManager &cvmanager) override | SSAGES::ForwardFlux | virtual |
PrintQueue() | SSAGES::ForwardFlux | protected |
ReadFFSConfiguration(Snapshot *snapshot, FFSConfigID &ffsconfig, bool wassuccess) | SSAGES::ForwardFlux | protected |
ReconstructTrajectories(Snapshot *) | SSAGES::ForwardFlux | protected |
SetCVMask(const std::vector< unsigned int > &mask) | SSAGES::Method | inline |
world_ | SSAGES::Method | protected |
WriteFFSConfiguration(Snapshot *snapshot, FFSConfigID &ffsconfig, bool wassuccess) | SSAGES::ForwardFlux | protected |
WriteInitialFlux() | SSAGES::ForwardFlux | protected |
~EventListener() | SSAGES::EventListener | inlinevirtual |
~Method() | SSAGES::Method | inlinevirtual |