SSAGES  0.9.3
Software Suite for Advanced General Ensemble Simulations
SSAGES::RMSDCV Member List

This is the complete list of members for SSAGES::RMSDCV, including all inherited members.

atomids_SSAGES::RMSDCVprivate
bounds_SSAGES::CollectiveVariableprotected
boxgrad_SSAGES::CollectiveVariableprotected
Build(const Json::Value &json, const std::string &path)SSAGES::RMSDCVinlinestatic
BuildCV(const Json::Value &json, const std::string &path)SSAGES::CollectiveVariablestatic
CollectiveVariable()SSAGES::CollectiveVariableinline
COMref_SSAGES::RMSDCVprivate
Evaluate(const Snapshot &snapshot) overrideSSAGES::RMSDCVinline
SSAGES::CollectiveVariable::Evaluate(const class Snapshot &)=0SSAGES::CollectiveVariablepure virtual
GetBoundaries()SSAGES::CollectiveVariableinline
GetBoxGradient() constSSAGES::CollectiveVariableinline
GetDifference(double location) constSSAGES::CollectiveVariableinlinevirtual
GetGradient() constSSAGES::CollectiveVariableinline
GetMinimumImage(double) constSSAGES::CollectiveVariableinlinevirtual
GetPeriodicValue(double location) constSSAGES::CollectiveVariableinlinevirtual
GetValue() constSSAGES::CollectiveVariableinline
grad_SSAGES::CollectiveVariableprotected
Initialize(const Snapshot &snapshot) overrideSSAGES::RMSDCVinline
SSAGES::CollectiveVariable::Initialize(const class Snapshot &)SSAGES::CollectiveVariableinlinevirtual
refcoord_SSAGES::RMSDCVprivate
RMSDCV(const Label &atomids, std::string xyzfile, bool use_range=false)SSAGES::RMSDCVinline
val_SSAGES::CollectiveVariableprotected
xyzfile_SSAGES::RMSDCVprivate
~CollectiveVariable()SSAGES::CollectiveVariableinlinevirtual