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SSAGES
0.9.3
Software Suite for Advanced General Ensemble Simulations
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This is the complete list of members for SSAGES::Swarm, including all inherited members.
| Build(const Json::Value &json, const MPI_Comm &world, const MPI_Comm &comm, const std::string &path) | SSAGES::StringMethod | static |
| BuildMethod(const Json::Value &json, const MPI_Comm &world, const MPI_Comm &comm, const std::string &path) | SSAGES::Method | static |
| centers_ | SSAGES::StringMethod | protected |
| CheckEnd(const CVList &CV) | SSAGES::StringMethod | protected |
| comm_ | SSAGES::Method | protected |
| cv_drift_ | SSAGES::Swarm | private |
| CVInitialized(const CVList &cvs) | SSAGES::Swarm | private |
| cvmask_ | SSAGES::Method | protected |
| cvspring_ | SSAGES::StringMethod | protected |
| distance(const std::vector< double > &x, const std::vector< double > &y) const | SSAGES::StringMethod | inlineprotected |
| EventListener(unsigned int frequency) | SSAGES::EventListener | inline |
| frequency_ | SSAGES::EventListener | private |
| GatherNeighbors(std::vector< double > *lcv0, std::vector< double > *ucv0) | SSAGES::StringMethod | protected |
| GetFrequency() const | SSAGES::EventListener | inline |
| GetNumWalkers(const MPI_Comm &world, const MPI_Comm &comm) | SSAGES::EventListener | inlinestatic |
| GetWalkerID(const MPI_Comm &world, const MPI_Comm &comm) | SSAGES::EventListener | inlinestatic |
| harvest_length_ | SSAGES::Swarm | private |
| index_ | SSAGES::Swarm | private |
| initialize_steps_ | SSAGES::Swarm | private |
| initialized | SSAGES::Swarm | private |
| IsMasterRank(const MPI_Comm &comm) | SSAGES::EventListener | inlinestatic |
| iteration_ | SSAGES::StringMethod | protected |
| iterator_ | SSAGES::StringMethod | protected |
| maxiterator_ | SSAGES::StringMethod | protected |
| Method(unsigned int frequency, const MPI_Comm &world, const MPI_Comm &comm) | SSAGES::Method | inline |
| mpiid_ | SSAGES::StringMethod | protected |
| newcenters_ | SSAGES::StringMethod | protected |
| number_trajectories_ | SSAGES::Swarm | private |
| numnodes_ | SSAGES::StringMethod | protected |
| original_initialized | SSAGES::Swarm | private |
| PostIntegration(Snapshot *snapshot, const class CVManager &cvmanager) override | SSAGES::Swarm | virtual |
| PostSimulation(Snapshot *snapshot, const class CVManager &cvmanager) override | SSAGES::StringMethod | virtual |
| PreSimulation(Snapshot *snapshot, const class CVManager &cvmanager) override | SSAGES::StringMethod | virtual |
| prev_IDs_ | SSAGES::StringMethod | protected |
| prev_positions_ | SSAGES::StringMethod | protected |
| prev_velocities_ | SSAGES::StringMethod | protected |
| PrintString(const CVList &CV) | SSAGES::StringMethod | protected |
| recneigh_ | SSAGES::StringMethod | protected |
| restrained_steps_ | SSAGES::Swarm | private |
| sampling_started | SSAGES::Swarm | private |
| sendneigh_ | SSAGES::StringMethod | protected |
| SetCVMask(const std::vector< unsigned int > &mask) | SSAGES::Method | inline |
| SetSendRecvNeighbors() | SSAGES::StringMethod | |
| SetTolerance(std::vector< double > tol) | SSAGES::StringMethod | inline |
| snapshot_stored | SSAGES::Swarm | private |
| StringMethod(const MPI_Comm &world, const MPI_Comm &comm, const std::vector< double > ¢ers, unsigned int maxiterations, const std::vector< double > cvspring, unsigned int frequency) | SSAGES::StringMethod | inline |
| stringout_ | SSAGES::StringMethod | protected |
| StringReparam(double alpha_star) | SSAGES::StringMethod | protected |
| StringUpdate() override | SSAGES::Swarm | privatevirtual |
| Swarm(const MPI_Comm &world, const MPI_Comm &comm, const std::vector< double > ¢ers, unsigned int maxiterations, const std::vector< double > cvspring, unsigned int frequency, unsigned int InitialSteps, unsigned int HarvestLength, unsigned int NumberTrajectories, unsigned int SwarmLength) | SSAGES::Swarm | inline |
| swarm_length_ | SSAGES::Swarm | private |
| tol_ | SSAGES::StringMethod | protected |
| TolCheck() const | SSAGES::StringMethod | inlineprotected |
| traj_atomids_ | SSAGES::Swarm | private |
| unrestrained_steps_ | SSAGES::Swarm | private |
| UpdateWorldString(const CVList &cvs) | SSAGES::StringMethod | protected |
| world_ | SSAGES::Method | protected |
| worldstring_ | SSAGES::StringMethod | protected |
| ~EventListener() | SSAGES::EventListener | inlinevirtual |
| ~Method() | SSAGES::Method | inlinevirtual |
| ~StringMethod() | SSAGES::StringMethod | inlinevirtual |
| ~Swarm() | SSAGES::Swarm | inline |